Scanning floppy disks

I don't need a solution because the programmers will have to figure this out.  I have been scanning my old 3 1/2" disks.  The scans have found several very old viruses.  On some disks the scan simply stops.  The light goes out on the floppy drive, a USB.  The scanning window sits there like is it working.  I try to STOP it, it won't.  I have to use the Task Manager to kill it.  Then my computer won't shut down.  I have to hard power it or reset it.  It turns out that the disks on which this happen have bad sectors.  The program freezes up when those sectors are hit.